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molsim

Accelerate drug discovery from hit identification to formulation.

Use Cases

Built for real-world problems

Calculate relative and absolute binding free energies with chemical accuracy. Predict how structural modifications affect potency before synthesising a single compound. Our FEP engine handles charge-changing perturbations and large scaffold hops.

Multiscale + HPC

Multiscale simulation for drug discovery

Drug discovery spans from quantum-level electron interactions in binding pockets to macro-scale formulation and manufacturing. Each scale informs the next, and errors compound at every handoff. newtsim keeps the physics continuous across all of them.

  • Quantum mechanics for binding energies and reaction pathways
  • Molecular dynamics for protein-ligand interactions and conformational sampling
  • Coarse-grained models for membrane permeability and aggregation
  • Continuum simulation for manufacturing process design

GPU-accelerated FEP calculations that used to take weeks now complete in hours. Run entire lead optimisation campaigns computationally: hundreds of compounds scored in parallel on our HPC clusters.

Workflow + AI

From target to manufacturing in one workflow

Connect every stage of the drug discovery pipeline in a single visual workflow. Start with a protein structure, run docking, refine with FEP, simulate ADMET properties, and design the manufacturing process without switching tools. AI guides parameter selection at every step.

Import your protein target and compound library

Chain docking, MD, and FEP simulation nodes

AI selects force fields and sampling parameters

Results rank compounds by predicted efficacy

Questions about molsim?

Reach out to discuss how molsim fits your workflows.

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